{"about":{"site":"https://codewithpapers.app","non_affiliation":"Code with Papers and Syntology are not affiliated with, endorsed by, or sponsored by Papers with Code, Meta, or the pwc-archive mirror.","licence":"CC BY-SA 4.0","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","attribution":"https://codewithpapers.app/attribution","modified":"archive material modified by Syntology; see the attribution page"},"url":"/paper/accurate-and-robust-alignment-of-variable","title":"Accurate and Robust Alignment of Variable-stained Histologic Images Using a General-purpose Greedy Diffeomorphic Registration Tool","arxiv_id":"1904.11929","date":"2019-04-26","proceeding":null,"authors":["Ludovic Venet","Sarthak Pati","Paul Yushkevich","Spyridon Bakas"],"abstract":"Variously stained histology slices are routinely used by pathologists to\nassess extracted tissue samples from various anatomical sites and determine the\npresence or extent of a disease. Evaluation of sequential slides is expected to\nenable a better understanding of the spatial arrangement and growth patterns of\ncells and vessels. In this paper we present a practical two-step approach based\non diffeomorphic registration to align digitized sequential histopathology\nstained slides to each other, starting with an initial affine step followed by\nthe estimation of a detailed deformation field.","url_abs":"http://arxiv.org/abs/1904.11929v1","url_pdf":"http://arxiv.org/pdf/1904.11929v1.pdf","source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28","licence_url":"https://creativecommons.org/licenses/by-sa/4.0/legalcode","row_kind":"abstracts"},"code_links":[{"paper_slug":"accurate-and-robust-alignment-of-variable","repo_url":"https://github.com/CBICA/HistoReg","is_official":1,"mentioned_in_paper":1,"mentioned_in_github":1,"framework":"none","reach":null}],"tasks":[],"methods":[],"datasets_introduced":[],"methods_introduced":[],"results":[],"syntology":{"atlas_url":null,"mcp":null,"developers":"https://syntology.ai/developers"},"arxiv_metadata":null,"syntology_extracted_results":null}