{"url":"/dataset/a-dependency-graph-for-460000-papers-and","name":"A Dependency Graph for 460,000 Papers and Their Software Mentions from the CZI Software Mentions Dataset","full_name":null,"description_markdown":"Using the CZI Software Mentions Dataset and ecosyste.ms we create a graph of papers, their mentioned software, and recursive dependencies of each piece of software across 466,000 papers and three software registries (PyPI, CRAN, and BioConductor).","description_withheld":null,"homepage":"https://zenodo.org/records/10048132","introduced_date":"2023-10-27","introduced_date_note":null,"introduced_by":{"paper":"/paper/biomedical-open-source-software-crucial","title":"Biomedical Open Source Software: Crucial Packages and Hidden Heroes","first_author":null,"url":null},"license":{"name":"CC-BY","url":null},"modalities":[],"tasks":[],"languages":[],"variants":["A Dependency Graph for 460,000 Papers and Their Software Mentions from the CZI Software Mentions Dataset"],"data_loaders":[],"num_papers_in_archive":1,"source":{"archive":"pwc-archive (Hugging Face), CC BY-SA 4.0","snapshot":"2025-07-28"},"benchmarks":[],"papers_with_a_benchmark_row":[],"syntology_totals":{"read_at":"2026-09-24T18:15:14+00:00","papers_with_samples":0,"samples_harvested":0,"samples_ran":0,"samples_unverified":0,"pointer_only_for_licence":0,"papers_with_no_sample_that_ran":0,"note":"the per-paper counts above, summed; not a rate"},"papers_note":"The archive never published its papers-using-dataset list; these are papers with a leaderboard row on this dataset's benchmarks."}